Yearly Archives: 2017

Authors: Manoj Wijesekara & Pathmalal Manage
Journal: Journal of Tropical Forestry and Environment

Cyanobacteria, highly diverse group of prokaryotes are recognized as a potent source of biologically active compounds with antiviral, antibacterial, antifungal, and anticancer properties.The aim of the present study was to screen antibacterial, antifungal and cytotoxic activities of intracellular secondary metabolites of freshwater cyanobacterium Oscillataria sp. Cyanobacterium Oscillatoria sp. was isolated from Senanayaka Samudraya reservoir (70 11’ 37.370N 810 31’ 47.130E), Sri Lanka.In vitro antibacterial and antifungal activity of Oscillatoria sp. was screened against Gram-positive Methicillin-resistant Staphylococcus aureus (MRSA) ATCC 25923, Bacillus anthracis and Gram-negative Pseudomonas aeruginosa (ATCC 25853), Salmonella typhi and Escherichia coli (ATCC 25922) and fungi, unicellular Candida albicans (ATCC 60192) and Candida tropicalis using agar disc diffusion method.The Minimum Inhibitory Concentrations (MIC), Minimum Bacteriocidal Concentration (MBC), Minimum Fungicidal Concentrations (MFC) and cytotoxic effects (brine shrimp bioassay) of Oscillatoria crude extract were determined. 10% and 60% of biomass was extracted with hexane and methanol respectively.Gas Chromatography-Mass Spectrometry (GC-MS) was used to identify compounds in the crude extract. The highest antibacterial and antifungal activity of crude extract were detectedin methanol extract against S.aureus (19 ± 2 mm)and C.albicans (10 ± 1 mm) within 24 hours wherein the hexane extract, antibacterial activity was detected only for S. aureus and mean diameter of inhibition zone was 11 ± 1mm within 24 hours.The lowest MIC of methanol extract against S. aureus wasfound as 156.25 μg/ml. The lowest MBC and MFC of methanol extract againstS. aureus and C.albicans were 0.63 mg/ml and 1.25mg/ml respectively. Lethal concentration, 50% of the crude extract against brine shrimp was recorded at 2.50 g/l, 1.25 g/l and 0.625 g/l for 6, 12, 24 hrs intervals respectively. GC-MS analysis revealed that the methanol crude extract of Oscillatoria sp. contains important fatty acid namely hexadecanoic acid methyl ester, methyl tetradecane and 13-tetradecanoic acid and n-hexane extract contains Bis (2-ethylhexyl hydroxypyridine oxide, 1 2-benzenedicarboxylic acid mono (2-ethylhexyl) ester, Phthalic acid 6-ethyl-3-Octyl heptyl ester and Phthalic acid dodecyl nonyl ester which may possess antibacterial and antifungal properties.

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Authors: PS Dharmadasa, GY Liyanage, PM Manage
Journal: Journal of Tropical Forestry and Environment

Pollution reaches its most serious proportion in past few decades and adversely effect on animals and human health. Reduction of pollutant in the environment take place with microbial metabolism and remediation studies by microbes have proved their feasibility on clean up the contaminated environment. Thus, the present study reports the biodegradation of Micocystins (MC-LR) and antibiotics [Oxytetracycline (OTC) and Ampicillin (AMP)] by Bacillus cereus, Enterobacter ulcerans, Enterobacter sp. and Micrococcus sp. strains which were previously reported as potential crude oil degraders.  A 0.5 ml of overnight starved bacterial suspensions was introduced into medium containing antibiotic (OTC, AMP) at 60 µg/ml and Microcystin-LR at 10 µg/ml respectively. Triplicate samples were incubated at 28⁰C while shaking at 100 rpm. A 0.5 ml of aliquots was removed at 2 days interval for a period of 14 days and analysis was done by High Performance Liquid Chromatography (HPLC). The highest degradation of MC- LR was shown by Micrococcus sp. (97%) where as other stains; E. ulcerans (96 %), Enterobactor sp. (95 %) and B. cereus (88%) also showed comparative high degradation after 14 days of incubation. B. cereus, Enterobacter sp. and Micrococcus sp. were identified as AMP resistance bacteria and degraded AMP at 81%, 22% and 39% respectively. It was found that B. cereus was resistance to OTC and showed 56% reduction at 14 days of incubation. The results of the present study revealed that the bioremediation potential of harnessing microbes can cleanup of pollutant in the environment and use as eco friendly tool for removal of environmental pollutants.

Authors: Beneeta Jayawardena, Gayani  Senevirathne, Nayana Wijayathilaka, Kanishka Ukuwela, Kelum Manamendra-Arachchi and Madhava Meegaskumbura
Journal: Ceylon Journal of Science

Species boundaries and patterns of gene flow in Dwarf toads, Duttaphrynus scaber and D. atukoralei, were assessed using mitochondrial DNA markers. Samples from four populations in Sri Lanka (Mihintale, Ampara, Yala, Galle) were analyzed for three mitochondrial gene fragments (16S rRNA, COI and Cyt b) along with four Genbank sequences of 16S rRNA from Indian samples (Thiruvananthapuram, Maharashtra, Mudigere). Phylogenetic trees and haplotype networks were generated, and morphology was assessed. Analyses suggest a single species (Duttaphrynus scaber) with three major clades: a widespread clade shared between India and Northern Sri Lanka, an Eastern and Southeastern Sri Lankan clade (previously referred to as D. atukoralei, the validity of which, however, our analysis disputes), and a distinct Southern wet-zone clade from Galle (referred previously to as D. atukoralei). Duttaphrynus atukoralei (topotypes from Yala, Sri Lanka) is genetically too close to  (Indian and northern Sri Lankan clade) to be distinguished as a species; these two clades have a genetic distance of 0.95 – 1.55% for the 16S rRNA fragment. The haplotype networks for the 16S rRNA gene suggest incomplete lineage sorting between the Ampara and Yala populations; COI and Cyt b show complete sorting for all populations analyzed, suggesting strong population structure. All analyses suggest substantially restricted gene flow to the southern wet-zone population (Galle). This population also assumes a basal phylogenetic position, suggesting that D. scaber first evolved in southern Sri Lanka’s wet zone and dispersed across the lowland areas of the island and to India. Here, we provisionally recognize this population (Galle) as an evolutionarily significant unit of D. scaber; future analyses using multiple criteria may indicate this to be a new Dwarf toad species. External morphology is largely uninformative as the Yala, Ampara and Galle populations cannot be distinguished from each other; the morphological distinction between Yala, Ampara, Galle versus Mihintale is restricted to only the shape of the parotid glands – slightly oval versus rounded – a minor difference. Both genetic and morphological evidence so far suggest that there is only a single Dwarf toad species in Sri Lanka, which is also shared with India, namely Duttaphrynus scaber; however, with strong population structure, including an evolutionarily significant unit (Southern wet-zone population).

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